PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma171g00310.1
Common NameZOSMA_171G00310
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 211aa    MW: 23835.9 Da    PI: 6.3015
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma171g00310.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.28.2e-10174203130
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPka 30 
                       +r++h ++Er+RR+ +N+ ++ Lr+l+P++
  Zosma171g00310.1 174 QRMSHIAVERNRRRVMNDHLAALRSLMPPS 203
                       79**************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.62E-8166206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.72E-7172207No hitNo description
Gene3DG3DSA:4.10.280.102.6E-8172205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.706173210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-7174203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MAGWASFSAA LQFYGDYMGL DCLEEDGQQQ QHITGIDSCF VDCNNDATAY DSSSVMDTAQ  60
CCYHQMPFLH MLQEKTALFV ELESHPETRH QQQPQPQTNS FQLLLRLQEE QLLLNRQPPP  120
PLPHAKISSL EIDSCVTADV AGVEKVKVEG EEKKKRKRCR SSSTAKKAEE AESQRMSHIA  180
VERNRRRVMN DHLAALRSLM PPSYIQRVSL *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174185RMSHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PSA41e-158A0A0K9PSA4_Z
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP79573344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01460.12e-15bHLH family protein